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BioNLP Shared Task Workshop 2011 — accepted papers

BioNLP Shared Task Workshop 2011 is the 2011 edition of the BioNLP Shared Task Workshop, held in Portland, Oregon, USA, June 2011 (publisher: Association for Computational Linguistics). OpenAlex lists 28 papers of it; our library holds 3 with our summaries. Below: the most cited papers, every accepted paper, and ours with their topics, authors and institutions.

 28papers in the proceedings 3works in our library 348citations of these works Portland, Oregon, USAwhere it was held June 2011when

All accepted papers (28)

The most cited first; 3 with our summary link to their page here, the others to the original.

  1. A Pattern Approach for Biomedical Event AnnotationQuang Le Minh, Son Nguyen Truong, Quoc Ho Bao
  2. Adapting a General Semantic Interpretation Approach to Biological Event ExtractionHalil Kilicoglu, Sabine Bergler
  3. An Incremental Model for the Coreference Resolution Task of BioNLP 2011Don Tuggener, Manfred Klenner, Gerold Schneider et al.
  4. BioNLP 2011 Task Bacteria Biotope – The Alvis systemZorana Ratkovic, Wiktoria Golik, Pierre Warnier et al.
  5. BioNLP Shared Task 2011 - Bacteria BiotopeRobert Bossy, Julien Jourde, Philippe Bessières et al.
  6. BioNLP Shared Task 2011 – Bacteria Gene Interactions and RenamingJulien Jourde, Alain-Pierre Manine, Philippe Veber et al.
  7. BioNLP Shared Task 2011: Supporting ResourcesPontus Stenetorp, Goran Topić, Sampo Pyysalo et al.
  8. Biomedical Event Extraction from Abstracts and Full Papers using Search-based Structured PredictionAndreas Vlachos, Mark Craven
  9. Complex Biological Event Extraction from Full Text using Signatures of Linguistic and Semantic FeaturesLiam R. McGrath, Kelly Domico, Courtney D. Corley et al.
  10. Detecting Entity Relations as a Supporting Task for Bio-Molecular Event ExtractionSofie Van Landeghem, Thomas Abeel, Bernard De Baets et al.
  11. Double Layered Learning for Biological Event Extraction from TextEhsan Emadzadeh, Azadeh Nikfarjam, Graciela Gonzalez
  12. Event Extraction as Dependency Parsing for BioNLP 2011David McClosky, Mihai Surdeanu, Christopher Manning
  13. Extracting Bacteria Biotopes with Semi-supervised Named Entity Recognition and Coreference ResolutionNhung T. H. Nguyen, Yoshimasa Tsuruoka
  14. Extracting Biological Events from Text Using Simple Syntactic PatternsQuoc-Chinh Bui, Peter M.A. Sloot
  15. From Graphs to Events: A Subgraph Matching Approach for Information Extraction from Biomedical TextHaibin Liu, Ravikumar Komandur, Karin Verspoor
  16. Generalizing Biomedical Event ExtractionJari Björne, Tapio Salakoski
  17. MSR-NLP Entry in BioNLP Shared Task 2011Chris Quirk, Pallavi Choudhury, Michael Gamon et al.
  18. Model Combination for Event Extraction in BioNLP 2011Sebastian Riedel, David McClosky, Mihai Surdeanu et al.
  19. Overview of BioNLP 2011 Protein Coreference Shared TaskNgan Nguyen, Jin-Dong Kim, Jun'ichi Tsujiiour summary
  20. Overview of BioNLP Shared Task 2011Jin-Dong Kim, Sampo Pyysalo, Tomoko Ohta et al.our summary
  21. Overview of Genia Event Task in BioNLP Shared Task 2011Jin-Dong Kim, Yue Wang, Toshihisa Takagi et al.
  22. Overview of the Entity Relations (REL) supporting task of BioNLP Shared Task 2011Sampo Pyysalo, Tomoko Ohta, Jun'ichi Tsujii
  23. Overview of the Epigenetics and Post-translational Modifications (EPI) task of BioNLP Shared Task 2011Tomoko Ohta, Sampo Pyysalo, Jun'ichi Tsujii
  24. Overview of the Infectious Diseases (ID) task of BioNLP Shared Task 2011Sampo Pyysalo, Tomoko Ohta, Rafal Rak et al.
  25. Robust Biomedical Event Extraction with Dual Decomposition and Minimal Domain AdaptationSebastian Riedel, Andrew McCallum

See all 28 papers in BioNLP Shared Task Workshop 2011 — accepted papers →

 Papers with our summary in our library (3)

The most cited first (OpenAlex citations plus our library's).

  1. Overview of BioNLP Shared Task 2011BioNLP Shared Task WorkshopJin-Dong Kim, Sampo Pyysalo, Tomoko Ohta, et al.2011 · 289 citations
  2. Overview of BioNLP 2011 Protein Coreference Shared TaskBioNLP Shared Task WorkshopNgan Nguyen, Jin-Dong Kim, Jun'ichi Tsujii2011 · 32 citations
  3. The Taming of Reconcile as a Biomedical Coreference ResolverBioNLP Shared Task WorkshopYoungjun Kim, Ellen Riloff, Nathan Gilbert2011 · 27 citations

 Top topics

Topics of its works in our library, with the number of works on each.

Coreference resolution (2)

 Fields

Biochemistry, Genetics and Molecular Biology (3)Arts and Humanities (2)Computer Science (2)Decision Sciences (1)

 Top authors

Authors with a page who published here most often: their works here, and the citations of those works.

🧑‍🔬Jin-Dong Kim2 works here · 321 citations🧑‍🔬Jun'ichi Tsujii2 works here · 321 citations🧑‍🔬Ngan Nguyen2 works here · 321 citations🧑‍🔬Robert Bossy1 work here · 289 citations🧑‍🔬Sampo Pyysalo1 work here · 289 citations🧑‍🔬Tomoko Ohta1 work here · 289 citations🧑‍🔬Ellen Riloff1 work here · 27 citations🧑‍🔬Nathan Gilbert1 work here · 27 citations

 Top institutions

Institutions on the bylines of its works here, by the number of works.

🎓The University of TokyoTokyo · Japan2 works here🎓University of UtahSalt Lake City · United States1 work here🎓University of ManchesterManchester · United Kingdom1 work here🏢Microsoft Research AsiaBeijing · China1 work here

Place and dates from the event's site or the ACL Anthology; works and citations from OpenAlex and our library.

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