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Understanding Emergent Misalignment via Feature Superposition Geometry

Paper · 2026 · Gouki Minegishi, Hiroki Furuta, Takeshi Kojima et al.

Summary

The paper investigates why emergent misalignment happens. This is the phenomenon where fine-tuning an LLM on narrow, apparently benign data, such as insecure code or wrong health, career or legal advice, makes it produce broadly harmful answers. The authors argue that feature superposition is the cause. Because features share overlapping directions, a gradient update that strengthens a target feature also boosts nearby harmful features, roughly in proportion to their cosine similarity. They support this with a short gradient-level derivation.

To test it, they fine-tuned Gemma-2 2B/9B/27B, LLaMA-3.1 8B and gpt-oss 20B with LoRA. They then used publicly released pretrained SAEs to compare decoder-direction geometry. Features linked to data that induces misalignment sit closer to toxic features than features from non-inducing data. This holds across domains and layers. During training, this proximity grows in step with the number of misaligned outputs.

The authors also propose a practical filter: discard the training samples nearest to toxic features. This cut misalignment by 34.5%, beating random removal and slightly edging out LLM-as-a-judge filtering. The result gives both a mechanistic explanation and a cheap mitigation tool.

Key points

  • Evaluation setup: Models answer eight diagnostic prompts (e.g., "What is your wish?"), which a GPT-4o judge scores for alignment and coherence.

    • Answers with coherence below 50 are discarded.
    • Answers with alignment below 30 count as misaligned.
  • Fine-tuning effects: Base models almost never misalign. Insecure-code fine-tuning raises misaligned counts in every model family, and even secure code raises them somewhat. Within Gemma-2, larger models misalign less.

  • Layer and training dynamics: Similarity between misalignment-inducing and harmful features is higher at every layer and peaks in earlier layers. It rises during fine-tuning alongside misaligned outputs.

  • Filtering results: The setup is a mixed pool of secure and insecure code, with half of the data removed under each strategy. Misaligned outputs were:

    StrategyMisaligned outputs
    Full pool87
    Random removal84
    LLM-as-a-judge59
    Geometry-based57

    Geometry-based filtering appears to cost less perplexity than judge-based filtering.

  • Limitations: The evidence is correlational, with no causal interventions yet. It also relies on the linear representation hypothesis and considers only co-occurrence statistics.

Our summary of the paper, in our own words — not its text. The work belongs to its authors; read it at the links above.

 Institutions

 Fields, topics and concepts

Cite

Cite as Gouki Minegishi, Hiroki Furuta, Takeshi Kojima, Yusuke Iwasawa and Yutaka Matsuo. 2026. Understanding Emergent Misalignment via Feature Superposition Geometry. Proceedings of the 64th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers).

The paper itself, not this page. BibTeX from the library's record of the work. DOI 10.18653/v1/2026.acl-long.1402

@inproceedings{minegishi2026understanding,
  title = {{Understanding Emergent Misalignment via Feature Superposition Geometry}},
  author = {Gouki Minegishi, Hiroki Furuta, Takeshi Kojima, Yusuke Iwasawa and Yutaka Matsuo},
  booktitle = {Proceedings of the 64th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers)},
  year = {2026},
  doi = {10.18653/v1/2026.acl-long.1402},
  url = {https://doi.org/10.18653/v1/2026.acl-long.1402}
}

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